Papers - ISHIDA Masami

Isolation and cDNA cloning of four peptide toxins from the sea anemone Heteractis aurora

Tomohiro Homma, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 2024.10

Journal of Venomous Animals and Toxins including Tropical Diseases

Simple and rapid detection of ESBL blaSHV gene from an urban river in Tokyo by loop-mediated isothermal amplification

Masahiko Okai, Rintaro Endo, Masachika Takashio, Masami Ishida, Naoto Urano , 2022

Biocontrol Science

DOI

Comparison of benzo[a]pyrene-degrading activities between Olleya sp. ITB9 isolated from Tokyo Bay and other type strains of the genus Olleya

Naoto Urano, Aya　Matsushima,　Shione　Yamamoto,　Rintaro　Endo,　Masami　Ishida,　Masahiko　Okai,　Toshinori　Takei, Masachika Takashio , 2021.12

Biocontrol Science

Ethanol fermentation by high-stress-tolerance aquatic yeasts and their mutant

Naoto Urano, Masami Ishida, Yuka Naito, Rintaro Endo, Toshinori Takei, Masachika Takashio, Masahiko Okai , 2021.11

Advances in Microbiology

DOI

Draft genome sequences of the lipid-degrading bacteria Moritella sp. strains F1 and F3, isolated from mesopelagic seawater from the Sagami Trough, in Japan

Kei Kagawa, Rika Kogure, Masahiko Okai, Satoshi Kawano, Hidehiro Kondo, Ikuo Hirono, Masami Ishida , 2021.08

Microbiology Resouece Announcements

DOI

Q301P mutant of Vibrio PR protease affects activities under low-temperature and high-pressure conditions

Masahiko Okai, Chiori Onoue, Ryo Tsuda, Chihiro Ishigami, Chie Yoshida-Mishima, Naoto Urano, Chiaki Kato, Masami Ishida , 2020.10

Journal of Bioscience and Bioengineering

DOI

Behavior of antibiotic-resistant fecal coliforms in the stream of a sewage treatment plant in Tokyo

Naoto Urano, Masahiko Okai, Yusuke Tashiro, Azusa Takeuchi, Rintaro Endo, Masami Ishida, Masachika Takashio , 2020.07

Advances in Microbiology

DOI

Bioethanol production from molasses by yeasts with stress-tolerance isolated from aquatic environments in Japan

Yuka Naito, Masahiko Okai, Masami Ishida, MasachikaTakachio, Naoto Urano , 2019.12

Advances in Microbiology

DOI

Antibiotic-resistance of Fecal Coliforms at the Bottom of the Tama River, Tokyo.

Masahiko Okai, Hanako Aoki, Masami Ishida, Naoto Urano , 2019.09

Biocontrol science

DOI

Comamonas sp. 3ah48 is a dibenz[a,h]anthracene-degrading bacterium that is tolerant to heavy metals.

Masahiko Okai, Yusuke Ohki, Shione Yamamoto, Masachika Takashio, Masami Ishida, Naoto Urano , 2019.04

Letters in Applied Microbiology

DOI

Effect of acid species on Cryptococcus sp. T1 and construction of Its bioreactor system for continuous neutralization of acidic media

Shintaro Nagaoka, Yuko Kajiwara, Sayaka Toyama, Masahiko Okai, Masami Ishida, Noto Urano , 2019.01

Advances in Microbiology

DOI

Molecular phylogeny and phenotypic characterization of yeasts with a broadrange of pH tolerance isolated from natural aquatic environments

Naoto Urano, Ayaka Shirao, Yuka Naito, Masahiko Okai, Masami Ishida, Masachika Takashio , 2019.01

Advances in Microbiology

DOI

Enzymatic properties and the gene structure of a cold-adapted laminarinase from Pseudoalteromonas species LA

Daisuke Mitsuya, Takuya Sugiyama, Shuo Zhang, Yo Takeuchi, Masahiko Okai, Naoto Urano, Masami Ishida , 2018.07

Journal of Bioscience and Bioengineering

High ethanol production by marine-derived yeasts-Saccharomyces cerevisiae under stress pressures.

Naoto Urano, Ayaka Shirao, Masahiko Okai, Masami Ishida. , 2017.09

Advances in Microbiology

Isolation of aquatic yeasts with the ability to neutralize acidic media, from an extremely acidic river near Japan’s Kusatsu-Shirane Volcano.

Daisuke Mitsuya, Takuya Hayashi, Yu Wang, Mami Tanaka, Masahiko Okai, Masami Ishida, Naoto Urano. , 2017.07

Journal of Bioscience and Bioengineering

OACIS Paper URL

Citeromyces matritensis M37 is a salt-tolerant yeast that produces ethanol from salted algae

Masahiko Okai, Ayako Betsuno, Ayaka Shirao, Nobuo Obara, Kotaro Suzuki,Toshinori Takei, Masachika Takashio, Masami Ishida, Naoto Urano , 2017.03

Canadian Journal of Microbiology

Cascade bioethanol productions from glucose and mannitol in the saccharified konbu Laminariaceae by anaerobic and aerobic fermentations with two kinds of yeast

Daisuke Mitsuya, Masahiko Okai, Ryo Kawaguchi, Masami Ishida, Naoto Urano , 2016.09

Studies in Science and Technology

Purification and enzymatic properties of a neutral metalloprotease produced from the cold-adapted Vibrio species Pr21 isolated from deep seawater in Sagami Bay

Masami Ishida, Chie Yoshida-Mishima, Yosuke Maeda, Masashi Yamamoto, Ryo Tsuda, Haruto Ishii, Naoto Urano, Hiroshi Kabasawa , 2016.09

Fisheries Science

Isolation and characterization of benzo[a] pyrene-degrading bacteria from the Tokyo Bay area and Tama River in Japan

Masahiko Okai, Ikumi Kihara, Yuto Yokoyama, Masami Ishida, Naoto Urano , 2015.09

FEMS Microbiology Letters

Draft genome sequence of a benzo[a]pyrene-degrading bacteria, Olleya sp. strain ITB9

Masahiko Okai, Akihiro Watanabe, Masami Ishida, Naoto Urano , 2015.02

Genome Announcements

Bioethanol production from mixed biomass (waste of Undaria pinnatifida processing and paper shredding) by fermentation with marine-derived Saccharomyces cerevisiae

Nobuo Obara, Masahiro Okai, Masami Ishida, Naoto Urano , 2015.02

Fisheries Science

Comparison of ethanol productivity among yeast strains using three different seaweeds

Toshiyuki Takagi, Motoharu Uchida, Ryoji Matsushima, Hiroyuki Kodama, Tadaaki Takeda, Masami Ishida, Naoto Urano , 2015.02

Fisheries Science

Development of a simple isolation method for yeast Saccharomyces cerevisiae with high fermentative activities from coastal waters

Nobuo Obara, Nozomi Oki, Masahiko Okai, Masami Ishida, Naoto Urano , 2015.02

Studies in Science and Technology

Strategy for cold adaptation of the tryptophan synthase α subunit from the psychrophile Shewanella frigidimarina K14-2: Crystal structure and physicochemical properties

Daisuke Mitsuya, Shun-ichi Tanaka, Hiroyoshi Matsumura, Naoto Urano, Kazufumi Takano, Kyoko Ogasahara, Michiyo Takehira, Katsuhide Yutani, and Masami Ishida , 2014.02

Journal of Biochemistry

酵母による水圏バイオマスからのエタノール生産に及ぼす諸因子（糖／塩濃度・酵母種）の影響

小原信夫, 岡井公彦, 古川 彰, 石田真巳, 浦野直人 , 2014.02

科学・技術研究

キシロース発酵能を持つ新奇酵母によるバイオエタノール生産

小原信夫、榎牧子、岡井公彦、上田孝太郎、石田真巳、浦野直人 , 2014.02

Studies in Science and Technology

多摩川流域における多剤耐性菌の蔓延度解析

浦野直人、岡井公彦、相川和也、田中陽一郎、石田真巳 , 2013.02

Studies in Science and Technology

Efficient bioethanol production from water hyacinth Eichhornia crassipes by both preparation of the saccharified solution and selection of fermenting yeasts

Toshiyuki Takagi, Motoharu Uchida, Ryoji Matsushima, Masami Ishida and Naoto Urano , 2012.09

Fish. Sci.

Potential of carotenoids in aquatic yeasts as a phylogenetically reliable marker and natural colorant for aquaculture

Ryohei ueno, Naoko Hamada-Sato, Masami Ishida, Naoto Urano , 2011.10

Biosci. Biotechnol. Biochem.

Discovery of serum L-amino acid oxidase in the rockfish Sebastes schlegeli: Isolation and biochemical characterization

Yuichiro Kitani, Masami Ishida, Shoichiro Ishizaki, Yuji Nagashima , 2010.10

Comparative Biochemistry and Physiology, Part B

Identification of facultative anaerobic bacteria isolated from the intestine of the minke whale Balaenoptera acutorostrata by 16S rRNA sequencing analysis

Go Ogawa, Masami Ishida, Hidehiro Kato, Yoshihiro Fujise, Naoto Urano , 2010.05

Fish. Sci.

Isolation and identification of dibutyl phthalate-degrading bacteria from hydrosphares in Tokyo

Go Ogawa, Masami Ishida, Naoto Urano , 2009.05

J. Gen. Appl. Microbiol.

Isolation and characterization of Saccharomyces cerevisiae from hydrospheres

Go Ogawa, Masami Ishida, Ken Shimotori, Naoto Urano , 2008.05

Ann. Microbiol.

Novel peptide toxins from the sea anemone Stichodactyla haddoni

Tomohiro Honma, Shino Kawahara, Masami Ishida, Hiroshi Nagai, Yuji Nagashima, Kazuo Shiomi , 2008.05

Peptides

Identification of an antibacterial protein as L-amino acid oxidase in the skin mucus of rockfish Sebastes schlegeli

Yoichiro Kitani, Chihiro Tsukamoto, GuoHua Zhang, Hiroshi Nagai, Masami Ishida, Shoichiro Ishizaki, Kuniyoshi Shimakura, Kazuo Shiomi, Yuji Nagashima , 2007.11

FEBS J.

Isolation and cDNA cloning of a potassium channel peptide toxin from the sea anemone Anemonia erythraea

Yuichi Hasegawa, Tomohiro Honma, Hiroshi Nagai, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 2006.11

Toxicon

Conformational changes in the tryptophan synthase from a hyperthermophile upon a2b2complex formation: crystal structure of the complex

S.J.Lee, K.Ogasahara, J.Ma, K.Nishio, M.Ishida, Y.Yamagata, T.Tsukihara, K.Yutani , 2005.01

Biochemistry

Isolation and molecular cloning of novel peptide 　toxins from the sea anemone Antheopsis maculate

Tomohiro Honma, Yuichi Hasegawa, Masami Ishida, Hiroshi Nagai, Yuji Nagashima, Kazuo Shiomi , 2005.01

Toxicon

The crystal structure of　 the tryptophan synthase b2 subunit from the hyperthermophile 　Pyrococcus furiosus: Investigation of stabilization factors

Yusaku Hioki, Kyoko Ogasahara, Soo Jae Lee, Jichun Ma, Masami Ishida, Yuriko Yamagata, Yoshiki Matsuura, Motonori Ota, Mitsunori Ikeguchi, Seiki Kuramitsu, Katsuhide Yutani , 2004.01

Eur. J. Biochem.

Plancitoxins, lethal factors from the crown-of-thorns starfish Acanthaster planci, are deoxyribonucleases II

Kazuo Shiomi, Sayaka Midorikawa, Masami Ishida, Yuji Nagashima, Hiroshi Nagai , 2004.01

Toxicon

Purification, reactivity 　with IgE and cDNA cloning 　of parvalbumin as the major allergen of mackerels

Yuki Hamada, Hiroyuki Tanaka, Shoichiro Ishizaki, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 2003.01

Food Chem. Toxicol.

Occurrence of type 3 sodium channel peptide　 toxins in two species of sea anemones (Dofleinia armata and Entacmaea ramsayi)

Tomohiro Honma, Takeshi Iso, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 2003.01

Toxicon

Primary structure of echotoxin 2, an actinoporin-like hemolytic toxin from the salivary gland 　of the marine gastropod Monoplex echo

Yoko Kawashima, Hiroshi Nagai, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 2003.01

Toxicon

An epidermal growth factor-like toxin and two sodium channel toxins from 　the sea anemone　 Stichodactyla gigantea

Kazuo Shiomi, Tomohiro Honma, Masao Ide, Yuji Nagashima, Masami Ishida, Makoto Chino , 2003.01

Toxicon

Stimulated interaction between a and b subunits of tryptophan synthase from hyperthermophile enhances 　its thermal stability

Kyoko Ogasahara, Masami Ishida, Katsuhide Yutani , 2003.01

J. Biol. Chem.

Overexpression in Escherichia coli of the 　AT-rich trpA and trpB genes from the hyperthermophilic archaeon Pyrococcus　 furiosus

Masami Ishida, Tairo Oshima, Katsuhide Yutani , 2002.01

FEMS Microbiol. Lett.

Effective structure of a leader open reading frame　 for enhancing the expression　 of GC-rich genes

Masami Ishida Tairo Oshima , 2002.01

J. Biochem.

Purification and some properties of histidine decarboxylase from Tetragenococcus muriaticus, a halophilic lactic acid bacterium

Yukifumi Konagaya, Bon Kimura, Masami Ishida, Tateo Fujii , 2002.01

J. Appl. Microbiol.

Assessing the end-point temperature of heated fish 　and shellfish meats

Musleh Uddin, Shoichiro Ishizaki, Masami Ishida, Munehiko Tanaka , 2002.01

Fisheries Sci.

Entropic stabilization of tryptophan synthase α-subunit from a　hyperthermophile, 　Pyrococcus furiosus: X-ray analysis and calorimetry

Yuriko Yamagata, Kyoko Ogasahara, Yusaku Hioki, Soo Jae Lee, Atsushi Nakagawa, Haruki Nakamura, Masami Ishida, Seiki Kuramitsu, Katsuhide Yutani , 2001.01

J. Biol. Chem.

Identification of tropomyosin as a major allergen in the octopus Octopus vulgaris and elucidation of its IgE-binding epitopes

Masaru Ishikawa, Fumi Suzuki, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 2001.01

Fisheries Sci.

Primary and secondary structures of grammistins, peptide toxins isolated from the skin secretion of the soapfish Pogonoperca punctata

Kazuo Shiomi, Hiroshi Yokota, Yuji Nagashima, Masami Ishida , 2001.01

Fisheries Sci.

Isolation and structures 　of grammistins, peptide toxins from the skin secretion of the soapfish Grammistes sexlineatus

Kazuo Shiomi, Tomoko Igarashi, Hiroshi Yokota, Yuji Nagashima, Masami Ishida , 2000.01

Toxicon

Purification, crystallization, and preliminary X-ray crystallographic analysis of Thermus thermophilus V1-ATPase B subunit

Terukazu Nogi, Takaaki A. Fukami, Masami Ishida, Masasuke Yoshida, Kunio Miki , 1999.01

J. Struct. Biol.

Characterization of ethanol-producing marine yeasts isolated from coastal water

Naoto Urano, Hiroyuki Hirai, Masami Ishida, Shigeru Kimura , 1998.11

Fisheries Sci.

Partial characterization of cDNA clones encoding the three distinct pro-a chains of type I collagen from rainbow trout

Masataka Saito, Naomichi Kunisaki, Ikuo Hirono, Takashi Aoki, Masami Ishida, Naoto Urano, Shigeru Kimura , 1998.05

Fisheries Sci.

Purification and IgE-binding epitopes of a major allergen in the 　gastropod Turbo cornutus

Masaru Ishikawa, Masami Ishida, Kuniyoshi Shimakura, Yuji Nagashima, Kazuo Shiomi , 1998.01

Biosci. Biotechnol. Biochem.

Amino acid sequence and biological activities of 　another Kunitz-type protease inhibitor isolated from the　 sea anemone Anthopleura 　aff .xanthogrammica

Sonomi Minagawa, Masami Ishida, Kuniyoshi Shimakura, Yuji Nagashima, Kazuo Shiomi , 1998.01

Fisheries Sci.

Primary structure of a potassium channel toxin　 from the sea anemone　 Actinia equina

Sonomi Minagawa, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 1998.01

FEBS Lett.

Tropomyosin, the major oyster Crassosterea gigas allergen and its IgE-binding epitopes

Masaru Ishikawa, Masami Ishida, Kuniyoshi Shimakura, Yuji Nagashima, Kazuo Shiomi , 1998.01

J. Food Sci.

V-ATPase of Thermus thermophilus is inactivated during ATP hydrolysis　but can synthesize ATP

Ken Yokoyama, Eiro Muneyuki, Toyoki Amano, Seiji Mizutani, Masasuke Yoshida, Masami Ishida, Shouji Ohkuma , 1998.01

J. Biol. Chem.

Screening of a mutant plasmid with high　 expression efficiency of GC-rich leuB gene of an extreme thermophile, 　Thermus thermophilus, in Escherichia coli

Toshiharu Suzuki, Yuji Tanaka, Masami Ishida, Morio Ishizuka, Akihiko Yamagishi, Tairo Oshima , 1997.01

J. Biochem.

Amino acid sequences of Kunitz-type protease　 inhibitors from the sea anemone Actinia equina

Masami Ishida, Sonomi Minagawa, Koji Miyauchi, Kuniyoshi Shimakura, Yuji Nagashima, Kazuo Shiomi , 1997.01

Fisheries Sci.

Halcurin, a polypeptide toxin from the sea anemone Halcurias sp, with a　 structural resemblance to　 type 1 and type 2 toxins

Masami Ishida, Aki Yokoyama, Kuniyoshi Shimakura, Yuji Nagashima, Kazuo Shiomi , 1997.01

Toxicon

Isolation and amino acid sequences of two　 Kunitz-type protease 　inhibitors from the sea anemone Anthopleura aff. Xanthogrammica

Sonomi Minagawa, Masami Ishida, Kuniyoshi Shimakura, Yuji Nagashima, Kazuo Shiomi , 1997.01

Comp. Biochem. Physiol.

Novel polypeptide toxins with crab lethality from the 　sea anemone Anemonia erythraea

Kazuo Shiomi, Wen-Hong Qian, Xin-Yu Lin, Kuniyoshi Shimakura, Yuji Nagashima, Masami Ishida , 1997.01

Biochim. Biophys. Acta

Highly efficient 　production of enzymes of an extreme thermophile, 　Thermus thermophilus: A practical method to overexpress GC-rich genes in Escherichia coli

Masami Ishida, Masasuke Yoshida, Tairo Oshima , 1997.01

Extremophiles

A polypeptide toxin in　 the sea anemone Actinia equina homologous with 　other sea anemone sodium channel toxins: isolation and amino acid sequence

Xinyu Lin, Masami Ishida, Yuji Nagashima, Kazuo Shiomi , 1996.01

Toxicon

Isolation and amino acid sequence of a polypeptide　 toxin from the sea anemone Radianthus crispus

Kazuo Shiomi, Xinyu Lin, Yuji Nagashima, Masami Ishida , 1996.01

Fisheries Sci.

Low-temperature high specific activity of 　tryptophan synthase from a marine psychrotolerant bacterium, Alteromonas sp K14-2

Masami Ishida, Masataka Saito, Shigeru Kimura, Fumio Nagayama , 1996.01

J. Mar. Biotechnol.

A leader open reading 　frame is essential for the expression in Escherichia　 coli of GC-rich leuB gene of 　an extreme thermophile, Thermus thermophilus

Masami Ishida ,Tairo Oshima , 1996.01

FEMS Microbiol. Lett.

Two kinds of neutral 　serine proteinases in salted muscle of anchovy, 　Englauris japonica

Masami Ishida, Nobuko Sugiyama, Mariko Sato, Fumio Nagayama , 1995.01

Biosci. Biotechnol. Biochem.

Isolation and amino acid sequences of polypeptide toxins in the Caribbean sea anemone Condylactis passiflora

Kazuo Shiomi, Xinyu Lin, Yuji Nagashima, Masami Ishida , 1995.01

Fisheries Sci.

Overexpression of genes of an extreme thermophile, Thermus thermophilus, in Escherichia coli cells

Masami Ishida ,Tairo Oshima , 1994.01

J. Bacteriol.

Thermostable proteinase in salted anchovy muscle

Masami Ishida, Shoko Niizeki, Fumio Nagayama , 1994.01

J. Food Sci.

Molecular characterization of fibrillar collagen from the body wall of starfish Asterias amurensis

Shigeru Kimura, Yuji Omura, Masami Ishida, Hiroko Shirai , 1993.01

Comp. Biochem. Physiol.

Characterization of an α3 chain from the skin type I collagen of chum salmon (Oncorhynchus keta)

Risako Matsui, Masami Ishida, Shigeru Kimura , 1991.01

Comp. Biochem. Physiol.

Characterization of two genetically distinct type I-like collagens from lamprey (Entosphenus japonicus)

Risako Matsui, Masami Ishida, Shigeru Kimura , 1990.01

Comp. Biochem. Physiol.

サケ亜目魚類I型コラーゲンのサブユニット組成

松井理佐子, 山内肇, 菅沼宏重, 石田真巳,木村 茂 , 1989.01

日水誌